HNSE-O2-4. Evolutionary Analysis of NLR Genes in Metrosideros through Comparative Genomics


Sarem Khilji1
Jae Choi2
Faculty Mentor: Elizabeth Stacy, Ph.D.1
1College of Science, School of Life Sciences
2New York University

ABSTRACT
Plants rely heavily on innate immunity toward pathogens due to the fact that many of them do not contain specialized adaptive immune system cells. In order to mount proper immune responses, plants must come up with several broad defense mechanisms. One such mechanism in these plants, nucleotide-binding domain & leucine-rich repeat (NLR) proteins, are key players when it comes to intracellular immune-related functions. While the biological functions and protein structure of NLR genes are similar across species, variation in NLR gene numbers and sequences among closely related plant taxa can play a key role in diversification and the evolution of reproductive isolating barriers. In this study, we examine variation in NLR genes within Hawaiian Metrosideros (Myrtaceae), an incipient adaptive radiation of woody taxa that show partial isolating barriers. By using NLR annotating software tools, examining the number of NLR genes through code, mapping these genes to their respective chromosomes, and looking at synteny between taxa, we hope to glean insight into the evolution of NLRs in Metrosideros and how variation of these NLR-mediated mechanisms may potentially confer reproductive isolation within taxa. Preliminary results suggest that pubescent Metrosideros taxa may have a greater number of NLR sequences than glabrous taxa while also varying in their distribution across chromosomes. Future synteny analysis will provide a framework for examining variation of these homologous genes and help to establish if gene order is a significant factor of NLR variation among different species.

Date

Nov 15 - 19 2021
Expired!

Time

All Day

Labels

HNSE: Podium Session 2
The Office of Undergraduate Research

Organizer

The Office of Undergraduate Research
Phone
702-895-4771
Email
our@unlv.edu
Website
http://unlv.edu/our

Speakers

One Reply to “HNSE-O2-4. Evolutionary Analysis of NLR Genes in Metrosideros through Comparative Genomics”

  1. Hi everyone! Thank you so much taking the time to view my presentation! These last few months have been an extremely exciting time for me in regards to research and so I am thrilled to hear any thoughts or feedback that you may have!

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